3RPS Transferase Transferase Inhibitor date Apr 27, 2011
title Structure Of Human Ck2alpha In Complex With The Atp-Competit Inhibitor 3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)Propan
authors N.Bischoff, J.Raaf, B.Olsen, M.Bretner, O.G.Issinger, K.Niefind
compound source
Molecule: Casein Kinase II Subunit Alpha
Chain: A, B
Fragment: Unp Residues 1-335
Synonym: Ck II Alpha
Ec: 2.7.11.1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Csnk2a1, Ck2a1
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
symmetry Space Group: P 43
R_factor 0.170 R_Free 0.228
crystal
cell
length a length b length c angle alpha angle beta angle gamma
72.010 72.010 133.120 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.30 Å
ligand 4B0, CL, SO4 BindingDB enzyme Transferase E.C.2.7.11.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceEnzymatic activity with an incomplete catalytic spine: insights from a comparative structural analysis of human CK2alpha and its paralogous isoform CK2alpha'., Bischoff N, Raaf J, Olsen B, Bretner M, Issinger OG, Niefind K, Mol Cell Biochem. 2011 Oct;356(1-2):57-65. Epub 2011 Jul 8. PMID:21739153
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (245 Kb) [Save to disk]
  • Biological Unit Coordinates (3rps.pdb1.gz) 121 Kb
  • Biological Unit Coordinates (3rps.pdb2.gz) 122 Kb
  • LPC: Ligand-Protein Contacts for 3RPS
  • CSU: Contacts of Structural Units for 3RPS
  • Structure Factors (450 Kb)
  • Retrieve 3RPS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3RPS from S2C, [Save to disk]
  • Re-refined 3rps structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3RPS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3RPS
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3RPS, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3rps] [3rps_A] [3rps_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3RPS: [S_TKc ] by SMART
  • Other resources with information on 3RPS
  • Community annotation for 3RPS at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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