3RUS Chaperone date May 05, 2011
title Crystal Structure Of Cpn-Rls In Complex With Adp From Methan Maripaludis
authors J.H.Pereira, C.Y.Ralston, N.R.Douglas, R.Kumar, R.P.Mcandrew, K.M J.A.King, J.Frydman, P.D.Adams
compound source
Molecule: Chaperonin
Chain: A, B, C, D
Synonym: Cpn
Engineered: Yes
Mutation: Yes
 Organism_scientific: Methanococcus Maripaludis
Organism_taxid: 39152
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: I 2 2 2
R_factor 0.174 R_Free 0.221
crystal
cell
length a length b length c angle alpha angle beta angle gamma
161.564 185.585 185.494 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.34 Å
ligand ADP, MG, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceMechanism of nucleotide sensing in group II chaperonins., Pereira JH, Ralston CY, Douglas NR, Kumar R, Lopez T, McAndrew RP, Knee KM, King JA, Frydman J, Adams PD, EMBO J. 2011 Dec 23. doi: 10.1038/emboj.2011.468. PMID:22193720
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (651 Kb) [Save to disk]
  • Biological Unit Coordinates (3rus.pdb1.gz) 2552 Kb
  • LPC: Ligand-Protein Contacts for 3RUS
  • CSU: Contacts of Structural Units for 3RUS
  • Structure Factors (2587 Kb)
  • Retrieve 3RUS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3RUS from S2C, [Save to disk]
  • Re-refined 3rus structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3RUS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3RUS
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3RUS, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3rus_C] [3rus_B] [3rus_A] [3rus] [3rus_D]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 3RUS
  • Community annotation for 3RUS at PDBWiki (http://pdbwiki.org)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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