3S88 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand NAG enzyme
Primary referenceA shared structural solution for neutralizing ebolaviruses., Dias JM, Kuehne AI, Abelson DM, Bale S, Wong AC, Halfmann P, Muhammad MA, Fusco ML, Zak SE, Kang E, Kawaoka Y, Chandran K, Dye JM, Saphire EO, Nat Struct Mol Biol. 2011 Nov 20;18(12):1424-7. doi: 10.1038/nsmb.2150. PMID:22101933
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (264 Kb) [Save to disk]
  • Biological Unit Coordinates (3s88.pdb1.gz) 255 Kb
  • Biological Unit Coordinates (3s88.pdb2.gz) 3036 Kb
  • Biological Unit Coordinates (3s88.pdb3.gz) 760 Kb
  • Biological Unit Coordinates (3s88.pdb4.gz) 759 Kb
  • Biological Unit Coordinates (3s88.pdb5.gz) 761 Kb
  • LPC: Ligand-Protein Contacts for 3S88
  • CSU: Contacts of Structural Units for 3S88
  • Structure Factors (381 Kb)
  • Retrieve 3S88 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3S88 from S2C, [Save to disk]
  • Re-refined 3s88 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3S88 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3s88] [3s88_H] [3s88_I] [3s88_J] [3s88_L]
  • SWISS-PROT database:
  • Domains found in 3S88: [IG_like] [IGv ] by SMART

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