3S8Q Crystal structure of the R-M controller protein C.Esp1396I OL operator complex date
authors McGeehan, J.E., Ball, N.J., Streeter, S.D., Thresh, S.J., Kneale, G.G.
compound source
symmetry
R_factor
R_Free 0.2187
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.10
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceRecognition of dual symmetry by the controller protein C.Esp1396I based on the structure of the transcriptional activation complex., McGeehan JE, Ball NJ, Streeter SD, Thresh SJ, Kneale GG, Nucleic Acids Res. 2011 Dec 30. PMID:22210861
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (97 Kb) [Save to disk]
  • Biological Unit Coordinates (3s8q.pdb1.gz) 91 Kb
  • CSU: Contacts of Structural Units for 3S8Q
  • Structure Factors (258 Kb)
  • Retrieve 3S8Q in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3S8Q from S2C, [Save to disk]
  • Re-refined 3s8q structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3S8Q in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3S8Q
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 3S8Q, from MSDmotif at EBI
  • Fold representative 3s8q from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3s8q_B] [3s8q_D] [3s8q_A] [3s8q] [3s8q_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3S8Q: [HTH_XRE ] by SMART
  • Other resources with information on 3S8Q
  • Community annotation for 3S8Q at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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