3SHY date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 5FO, MG, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceUtilization of Halogen Bond in Lead Optimization: A Case Study of Rational Design of Potent Phosphodiesterase Type 5 (PDE5) Inhibitors., Xu Z, Liu Z, Chen T, Chen T, Wang Z, Tian G, Shi J, Wang X, Lu Y, Yan X, Wang G, Jiang H, Chen K, Wang S, Xu Y, Shen J, Zhu W, J Med Chem. 2011 Aug 11;54(15):5607-11. Epub 2011 Jul 14. PMID:21714539
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (52 Kb) [Save to disk]
  • Biological Unit Coordinates (3shy.pdb1.gz) 47 Kb
  • LPC: Ligand-Protein Contacts for 3SHY
  • CSU: Contacts of Structural Units for 3SHY
  • Structure Factors (325 Kb)
  • Retrieve 3SHY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3SHY from S2C, [Save to disk]
  • Re-refined 3shy structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3SHY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3shy] [3shy_A]
  • SWISS-PROT database:
  • Domain found in 3SHY: [HDc ] by SMART

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