3SKU date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand BMA, NAG enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, A, C


E, F, D


Primary referenceStructure of herpes simplex virus glycoprotein d bound to the human receptor nectin-1., Di Giovine P, Settembre EC, Bhargava AK, Luftig MA, Lou H, Cohen GH, Eisenberg RJ, Krummenacher C, Carfi A, PLoS Pathog. 2011 Sep;7(9):e1002277. Epub 2011 Sep 29. PMID:21980294
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (430 Kb) [Save to disk]
  • Biological Unit Coordinates (3sku.pdb1.gz) 143 Kb
  • Biological Unit Coordinates (3sku.pdb2.gz) 140 Kb
  • Biological Unit Coordinates (3sku.pdb3.gz) 143 Kb
  • LPC: Ligand-Protein Contacts for 3SKU
  • CSU: Contacts of Structural Units for 3SKU
  • Structure Factors (451 Kb)
  • Retrieve 3SKU in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3SKU from S2C, [Save to disk]
  • Re-refined 3sku structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3SKU in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3sku] [3sku_A] [3sku_B] [3sku_C] [3sku_D] [3sku_E] [3sku_F]
  • SWISS-PROT database:
  • Domains found in 3SKU: [IG_like] [IGv ] by SMART

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