OCA Atlas for 3SL3

3SL3

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

DMS, EDO, EPE, PEG, PO4, ZN

enzyme

Gene
Ontology

Chain	Function	Process	Component
B, D, C, A

Primary reference

Thiophene inhibitors of PDE4: Crystal structures show a second binding mode at the catalytic domain of PDE4D2., Nankervis JL, Feil SC, Hancock NC, Zheng Z, Ng HL, Morton CJ, Holien JK, Ho PW, Frazzetto MM, Jennings IG, Manallack DT, Martin TJ, Thompson PE, Parker MW, Bioorg Med Chem Lett. 2011 Dec 1;21(23):7089-93. Epub 2011 Oct 5. PMID:22030030

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (234 Kb) [Save to disk]

Biological Unit Coordinates (3sl3.pdb1.gz) 61 Kb

Biological Unit Coordinates (3sl3.pdb2.gz) 59 Kb

Biological Unit Coordinates (3sl3.pdb3.gz) 60 Kb

Biological Unit Coordinates (3sl3.pdb4.gz) 61 Kb

LPC: Ligand-Protein Contacts for 3SL3

CSU: Contacts of Structural Units for 3SL3

Structure Factors (1207 Kb)

Retrieve 3SL3 in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 3SL3 from S2C, [Save to disk]

Re-refined 3sl3 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3SL3 in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3sl3] [3sl3_A] [3sl3_B] [3sl3_C] [3sl3_D]

SWISS-PROT database:

Domain found in 3SL3: [HDc ] by SMART

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