3SNH	Endocytosis	date	Jun 29, 2011
title	Crystal Structure Of Nucleotide-Free Human Dynamin1
authors	K.Faelber, O.Daumke
compound		source
Molecule: Dynamin-1 Chain: A Fragment: Unp Residues 6-746 Ec: 3.6.5.5 Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Dnm, Dnm1 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Rosetta2-De3 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet46-Eklic
symmetry	Space Group: C 2 2 21	R_factor 0.288 R_Free 0.331
crystal cell	length a length b length c angle alpha angle beta angle gamma 155.056 201.993 59.016 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	3.70 Å
ligand		enzyme	Hydrolase E.C.3.6.5.5 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Crystal structure of nucleotide-free dynamin., Faelber K, Posor Y, Gao S, Held M, Roske Y, Schulze D, Haucke V, Noe F, Daumke O, Nature. 2011 Sep 18;477(7366):556-60. doi: 10.1038/nature10369. PMID:21927000

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (230 Kb) [Save to disk] Biological Unit Coordinates (3snh.pdb1.gz) 444 Kb CSU: Contacts of Structural Units for 3SNH Structure Factors (92 Kb) Retrieve 3SNH in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3SNH from S2C, [Save to disk] Re-refined 3snh structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3SNH in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3SNH

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3SNH, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3snh_A] [3snh] SWISS-PROT database: Domain organization of by SWISSPFAM Domains found in 3SNH: [DYNc] [GED] [PH ] by SMART

Other resources with information on 3SNH

Community annotation for 3SNH at PDBWiki (http://pdbwiki.org)

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