3SVW date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 0AF, ACT, CA, EDO, HEC, MES, NA, PEG, PGE enzyme
Gene PDEN ; PDEN
Gene
Ontology
ChainFunctionProcessComponent
B, A
  • electron transfer activity


  • C, E


    D, F


    Primary referenceProline 107 is a major determinant in maintaining the structure of the distal pocket and reactivity of the high-spin heme of MauG., Feng M, Jensen LM, Yukl ET, Wei X, Liu A, Wilmot CM, Davidson VL, Biochemistry. 2012 Feb 28;51(8):1598-606. Epub 2012 Feb 10. PMID:22299652
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (581 Kb) [Save to disk]
  • Biological Unit Coordinates (3svw.pdb1.gz) 571 Kb
  • LPC: Ligand-Protein Contacts for 3SVW
  • CSU: Contacts of Structural Units for 3SVW
  • Structure Factors (2130 Kb)
  • Retrieve 3SVW in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3SVW from S2C, [Save to disk]
  • Re-refined 3svw structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3SVW in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3SVW
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 3SVW, from MSDmotif at EBI
  • Fold representative 3svw from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3svw] [3svw_A] [3svw_B] [3svw_C] [3svw_D] [3svw_E] [3svw_F]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3SVW
  • Community annotation for 3SVW at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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