3TAU Transferase date Aug 04, 2011
title Crystal Structure Of A Putative Guanylate Monophosphaste Kin Listeria Monocytogenes Egd-E
authors J.S.Brunzelle, Z.Wawrzak, O.Onopriyenko, J.Kwok, W.F.Anderson, A.Savchenko, Center For Structural Genomics Of Infectious Di (Csgid)
compound source
Molecule: Guanylate Kinase
Chain: A, B
Synonym: Gmp Kinase
Ec: 2.7.4.8
Engineered: Yes
Organism_scientific: Listeria Monocytogenes
Organism_taxid: 1639
Strain: Egd-E
Gene: Gmk, Lmo1827
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21-Codonplus(De3)-Ril
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pmcsg7
symmetry Space Group: P 21 21 21
R_factor 0.184 R_Free 0.220
crystal
cell
length a length b length c angle alpha angle beta angle gamma
58.733 65.321 107.320 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.05 Å
ligand MSE, NA, SO4 enzyme Transferase E.C.2.7.4.8 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • guanylate kinase activity


  • Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (145 Kb) [Save to disk]
  • Biological Unit Coordinates (3tau.pdb1.gz) 136 Kb
  • LPC: Ligand-Protein Contacts for 3TAU
  • CSU: Contacts of Structural Units for 3TAU
  • Structure Factors (384 Kb)
  • Retrieve 3TAU in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3TAU from S2C, [Save to disk]
  • Re-refined 3tau structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3TAU in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3TAU
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3TAU, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3tau_A] [3tau_B] [3tau]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3TAU: [GuKc ] by SMART
  • Other resources with information on 3TAU
  • Community annotation for 3TAU at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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