3TCL date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand IMD enzyme
Primary referenceStructure of HIV-1 gp120 V1/V2 domain with broadly neutralizing antibody PG9., McLellan JS, Pancera M, Carrico C, Gorman J, Julien JP, Khayat R, Louder R, Pejchal R, Sastry M, Dai K, O'Dell S, Patel N, Shahzad-Ul-Hussan S, Yang Y, Zhang B, Zhou T, Zhu J, Boyington JC, Chuang GY, Diwanji D, Georgiev I, Do Kwon Y, Lee D, Louder MK, Moquin S, Schmidt SD, Yang ZY, Bonsignori M, Crump JA, Kapiga SH, Sam NE, Haynes BF, Burton DR, Koff WC, Walker LM, Phogat S, Wyatt R, Orwenyo J, Wang LX, Arthos J, Bewley CA, Mascola JR, Nabel GJ, Schief WR, Ward AB, Wilson IA, Kwong PD, Nature. 2011 Nov 23. doi: 10.1038/nature10696. PMID:22113616
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (301 Kb) [Save to disk]
  • Biological Unit Coordinates (3tcl.pdb1.gz) 149 Kb
  • Biological Unit Coordinates (3tcl.pdb2.gz) 149 Kb
  • LPC: Ligand-Protein Contacts for 3TCL
  • CSU: Contacts of Structural Units for 3TCL
  • Structure Factors (1179 Kb)
  • Retrieve 3TCL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3TCL from S2C, [Save to disk]
  • Re-refined 3tcl structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3TCL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3tcl] [3tcl_A] [3tcl_B] [3tcl_H] [3tcl_L]
  • SWISS-PROT database:
  • Domains found in 3TCL: [IG_like] [IGv ] by SMART

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