3THT date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand AKG, MN, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
D, A, C, B


Primary referenceCrystal structure and RNA binding properties of the RNA recognition motif (RRM) and AlkB domains in human AlkB homolog 8 (ABH8), an enzyme catalyzing tRNA hypermodification., Pastore C, Topalidou I, Forouhar F, Yan AC, Levy M, Hunt JF, J Biol Chem. 2012 Jan 13;287(3):2130-43. Epub 2011 Nov 7. PMID:22065580
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (202 Kb) [Save to disk]
  • Biological Unit Coordinates (3tht.pdb1.gz) 51 Kb
  • Biological Unit Coordinates (3tht.pdb2.gz) 53 Kb
  • Biological Unit Coordinates (3tht.pdb3.gz) 50 Kb
  • Biological Unit Coordinates (3tht.pdb4.gz) 52 Kb
  • Biological Unit Coordinates (3tht.pdb5.gz) 197 Kb
  • Biological Unit Coordinates (3tht.pdb6.gz) 100 Kb
  • Biological Unit Coordinates (3tht.pdb7.gz) 191 Kb
  • Biological Unit Coordinates (3tht.pdb8.gz) 98 Kb
  • LPC: Ligand-Protein Contacts for 3THT
  • CSU: Contacts of Structural Units for 3THT
  • Structure Factors (423 Kb)
  • Retrieve 3THT in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3THT from S2C, [Save to disk]
  • Re-refined 3tht structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3THT in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3tht] [3tht_A] [3tht_B] [3tht_C] [3tht_D]
  • SWISS-PROT database:

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