3TMK date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand T5A enzyme
related structures by homologous chain: 1TMK
Gene
Ontology
ChainFunctionProcessComponent
A, F, D, H, C, B, G, E
  • thymidylate kinase activity
  • uridylate kinase activity


    • Primary referenceCrystal structure of yeast thymidylate kinase complexed with the bisubstrate inhibitor P1-(5'-adenosyl) P5-(5'-thymidyl) pentaphosphate (TP5A) at 2.0 A resolution: implications for catalysis and AZT activation., Lavie A, Konrad M, Brundiers R, Goody RS, Schlichting I, Reinstein J, Biochemistry 1998 Mar 17;37(11):3677-86. PMID:9521686
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (308 Kb) [Save to disk]
  • Biological Unit Coordinates (3tmk.pdb1.gz) 80 Kb
  • Biological Unit Coordinates (3tmk.pdb2.gz) 78 Kb
  • Biological Unit Coordinates (3tmk.pdb3.gz) 79 Kb
  • Biological Unit Coordinates (3tmk.pdb4.gz) 78 Kb
  • LPC: Ligand-Protein Contacts for 3TMK
  • CSU: Contacts of Structural Units for 3TMK
  • Likely Quarternary Molecular Structure file(s) for 3TMK
  • Structure Factors (909 Kb)
  • Retrieve 3TMK in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3TMK from S2C, [Save to disk]
  • Re-refined 3tmk structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3TMK in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3tmk] [3tmk_A] [3tmk_B] [3tmk_C] [3tmk_D] [3tmk_E] [3tmk_F] [3tmk_G] [3tmk_H]
  • SWISS-PROT database: [P00572]

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