3TQY Transferase date Sep 09, 2011
title Structure Of A Single-Stranded Dna-Binding Protein (Ssb), Fr Coxiella Burnetii
authors J.Cheung, M.C.Franklin, M.Rudolph, M.Cassidy, E.Gary, F.Burshteyn
compound source
Molecule: Single-Stranded Dna-Binding Protein
Chain: A, B, C, D
Synonym: Ssb, Helix-Destabilizing Protein
Ec: 2.7.7.6
Engineered: Yes
Organism_scientific: Coxiella Burnetii
Organism_taxid: 777
Strain: Rsa493
Gene: Cbu_0271, Ssb
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet
symmetry Space Group: P 1 21 1
R_factor 0.203 R_Free 0.275
crystal
cell
length a length b length c angle alpha angle beta angle gamma
54.842 103.702 54.995 90.00 94.78 90.00
method X-Ray Diffractionresolution 2.60 Å
ligand MSE enzyme Transferase E.C.2.7.7.6 BRENDA
Gene CBU
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceStructural Genomics for Drug Design against the Pathogen Coxiella burnetii., Franklin MC, Cheung J, Rudolph MJ, Burshteyn F, Cassidy M, Gary E, Hillerich B, Yao ZK, Carlier PR, Totrov M, Love JD, Proteins. 2015 Jun 1. doi: 10.1002/prot.24841. PMID:26033498
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (84 Kb) [Save to disk]
  • Biological Unit Coordinates (3tqy.pdb1.gz) 78 Kb
  • LPC: Ligand-Protein Contacts for 3TQY
  • CSU: Contacts of Structural Units for 3TQY
  • Structure Factors (1101 Kb)
  • Retrieve 3TQY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3TQY from S2C, [Save to disk]
  • Re-refined 3tqy structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3TQY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3TQY
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3TQY, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3tqy_B] [3tqy_D] [3tqy] [3tqy_C] [3tqy_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3TQY
  • Community annotation for 3TQY at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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