3TYF date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand GOL enzyme
Primary referenceLysophospholipid presentation by CD1d and recognition by a human Natural Killer T-cell receptor., Lopez-Sagaseta J, Sibener LV, Kung JE, Gumperz J, Adams EJ, EMBO J. 2012 Mar 6;31(8):2047-59. doi: 10.1038/emboj.2012.54. PMID:22395072
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (293 Kb) [Save to disk]
  • Biological Unit Coordinates (3tyf.pdb1.gz) 141 Kb
  • Biological Unit Coordinates (3tyf.pdb2.gz) 142 Kb
  • LPC: Ligand-Protein Contacts for 3TYF
  • CSU: Contacts of Structural Units for 3TYF
  • Structure Factors (295 Kb)
  • Retrieve 3TYF in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3TYF from S2C, [Save to disk]
  • Re-refined 3tyf structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3TYF in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3tyf] [3tyf_A] [3tyf_B] [3tyf_C] [3tyf_D]
  • SWISS-PROT database:
  • Domains found in 3TYF: [IG_like] [IGc1] [IGv ] by SMART

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