OCA Atlas for 3U2K

3U2K

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

087, MG BindingDB

enzyme

note

3U2K is a representative structure

Gene
Ontology

Chain	Function	Process	Component
B, A

Primary reference

Pyrrolamide DNA Gyrase Inhibitors: Fragment-based NMR Screening to Antibacterial Agents., Eakin AE, Green O, Hales N, Walkup GK, Bist S, Singh A, Mullen G, Bryant J, Embrey K, Gao N, Breeze A, Timms D, Andrews B, Uria-Nickelsen M, Demeritt J, Loch JT 3rd, Hull K, Blodgett A, Illingworth RN, Prince B, Boriack-Sjodin PA, Hauck S, Macpherson LJ, Ni H, Sherer B, Antimicrob Agents Chemother. 2011 Dec 19. PMID:22183167

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (140 Kb) [Save to disk]

Biological Unit Coordinates (3u2k.pdb1.gz) 70 Kb

Biological Unit Coordinates (3u2k.pdb2.gz) 66 Kb

LPC: Ligand-Protein Contacts for 3U2K

CSU: Contacts of Structural Units for 3U2K

Structure Factors (1683 Kb)

Retrieve 3U2K in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 3U2K from S2C, [Save to disk]

Re-refined 3u2k structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3U2K in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3u2k] [3u2k_A] [3u2k_B]

SWISS-PROT database:

Domains found in 3U2K: [HATPase_c] [TOP2c ] by SMART

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