3U4Z Dna Binding Protein date Oct 10, 2011
title Crystal Structure Of The Tetrahymena Telomerase Processivity Teb1 Ob-B
authors Z.Zeng, J.Huang, Y.Yang, M.Lei
compound source
Molecule: Telomerase-Associated Protein 82
Chain: A, B
Fragment: Unp Residues 375-483
Engineered: Yes
Organism_scientific: Tetrahymena Thermophila
Organism_taxid: 5911
Gene: Tap82
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
symmetry Space Group: P 1 21 1
R_factor 0.220 R_Free 0.266
crystal
cell
length a length b length c angle alpha angle beta angle gamma
34.551 65.841 57.845 90.00 100.01 90.00
method X-Ray Diffractionresolution 2.30 Å
Primary referenceStructural basis for Tetrahymena telomerase processivity factor Teb1 binding to single-stranded telomeric-repeat DNA., Zeng Z, Min B, Huang J, Hong K, Yang Y, Collins K, Lei M, Proc Natl Acad Sci U S A. 2011 Dec 20;108(51):20357-61. Epub 2011 Dec 5. PMID:22143754
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (41 Kb) [Save to disk]
  • Biological Unit Coordinates (3u4z.pdb1.gz) 19 Kb
  • Biological Unit Coordinates (3u4z.pdb2.gz) 19 Kb
  • Biological Unit Coordinates (3u4z.pdb3.gz) 38 Kb
  • CSU: Contacts of Structural Units for 3U4Z
  • Structure Factors (84 Kb)
  • Retrieve 3U4Z in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3U4Z from S2C, [Save to disk]
  • Re-refined 3u4z structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3U4Z in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3U4Z
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3U4Z, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3u4z] [3u4z_A] [3u4z_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3U4Z
  • Community annotation for 3U4Z at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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