OCA Atlas for 3U7B

3U7B

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

BMA, EDO, MAN, NAG

enzyme

Gene
Ontology

Chain	Function	Process	Component
C, D, B, E, A

Primary reference

The structure of a GH10 xylanase from Fusarium oxysporum reveals the presence of an extended loop on top of the catalytic cleft., Dimarogona M, Topakas E, Christakopoulos P, Chrysina ED, Acta Crystallogr D Biol Crystallogr. 2012 Jul;68(Pt 7):735-42. Epub 2012 Jun 15. PMID:22751658

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (295 Kb) [Save to disk]

Biological Unit Coordinates (3u7b.pdb1.gz) 61 Kb

Biological Unit Coordinates (3u7b.pdb2.gz) 62 Kb

Biological Unit Coordinates (3u7b.pdb3.gz) 60 Kb

Biological Unit Coordinates (3u7b.pdb4.gz) 62 Kb

Biological Unit Coordinates (3u7b.pdb5.gz) 60 Kb

LPC: Ligand-Protein Contacts for 3U7B

CSU: Contacts of Structural Units for 3U7B

Structure Factors (2523 Kb)

Retrieve 3U7B in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 3U7B from S2C, [Save to disk]

Re-refined 3u7b structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3U7B in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3u7b] [3u7b_A] [3u7b_B] [3u7b_C] [3u7b_D] [3u7b_E]

SWISS-PROT database:

Domain found in 3U7B: [Glyco_10 ] by SMART

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