OCA Atlas for 3U8H

3U8H

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

BHP, CA, CL

enzyme

Gene
Ontology

Chain	Function	Process	Component
B, A

Primary reference

Selective Inhibition of Human Group IIA-secreted Phospholipase A2 (hGIIA) Signaling Reveals Arachidonic Acid Metabolism Is Associated with Colocalization of hGIIA to Vimentin in Rheumatoid Synoviocytes., Lee LK, Bryant KJ, Bouveret R, Lei PW, Duff AP, Harrop SJ, Huang EP, Harvey RP, Gelb MH, Gray PP, Curmi PM, Cunningham AM, Church WB, Scott KF, J Biol Chem. 2013 May 24;288(21):15269-79. doi: 10.1074/jbc.M112.397893. Epub, 2013 Mar 12. PMID:23482564

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (91 Kb) [Save to disk]

Biological Unit Coordinates (3u8h.pdb1.gz) 42 Kb

Biological Unit Coordinates (3u8h.pdb2.gz) 43 Kb

Biological Unit Coordinates (3u8h.pdb3.gz) 83 Kb

LPC: Ligand-Protein Contacts for 3U8H

CSU: Contacts of Structural Units for 3U8H

Structure Factors (200 Kb)

Retrieve 3U8H in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 3U8H from S2C, [Save to disk]

Re-refined 3u8h structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3U8H in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3u8h] [3u8h_A] [3u8h_B]

SWISS-PROT database:

Domain found in 3U8H: [PA2c ] by SMART

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