3U8O date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CL, DAR, DPN, DTH, IOD, MRD, NA, NAG, NH2 enzyme
Gene
Ontology
ChainFunctionProcessComponent
H


L


Primary referenceRational design and characterization of d-phe-pro-d-arg-derived direct thrombin inhibitors., Figueiredo AC, Clement CC, Zakia S, Gingold J, Philipp M, Pereira PJ, PLoS One. 2012;7(3):e34354. Epub 2012 Mar 23. PMID:22457833
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (163 Kb) [Save to disk]
  • Biological Unit Coordinates (3u8o.pdb1.gz) 156 Kb
  • LPC: Ligand-Protein Contacts for 3U8O
  • CSU: Contacts of Structural Units for 3U8O
  • Structure Factors (4214 Kb)
  • Retrieve 3U8O in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3U8O from S2C, [Save to disk]
  • Re-refined 3u8o structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3U8O in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3u8o] [3u8o_H] [3u8o_I] [3u8o_L]
  • SWISS-PROT database:
  • Domain found in 3U8O: [Tryp_SPc ] by SMART

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