3UB4 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand DTV enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural insights into TIR domain specificity of the bridging adaptor Mal in TLR4 signaling., Lin Z, Lu J, Zhou W, Shen Y, PLoS One. 2012;7(4):e34202. Epub 2012 Apr 2. PMID:22485159
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (24 Kb) [Save to disk]
  • Biological Unit Coordinates (3ub4.pdb1.gz) 39 Kb
  • LPC: Ligand-Protein Contacts for 3UB4
  • CSU: Contacts of Structural Units for 3UB4
  • Structure Factors (85 Kb)
  • Retrieve 3UB4 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3UB4 from S2C, [Save to disk]
  • Re-refined 3ub4 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3UB4 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3ub4] [3ub4_A]
  • SWISS-PROT database:
  • Domain found in 3UB4: [TIR ] by SMART

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