3UDD	Transferase Transferase Inhibitor	date	Oct 28, 2011
title	Tankyrase-1 In Complex With Small Molecule Inhibitor
authors	C.A.Kirby, T.Stams
compound		source
Molecule: Tankyrase-1 Chain: A, B Fragment: Catalytic Domain (Unp Residues 1105-1327) Synonym: Tank1, Poly [Adp-Ribose] Polymerase 5a, Tnks-1, Tr Interacting Ankyrin-Related Adp-Ribose Polymerase, Tankyras Ec: 2.4.2.30 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: C 1 2 1	R_factor 0.172 R_Free 0.225
crystal cell	length a length b length c angle alpha angle beta angle gamma 124.320 44.690 88.200 90.00 90.17 90.00
method	X-Ray Diffraction	resolution	1.95 Å
ligand	34M, GOL, SO4, ZN BindingDB	enzyme	Transferase E.C.2.4.2.30 BRENDA
Gene Ontology	Chain Function Process Component A, B
Primary reference	[1,2,4]Triazol-3-ylsulfanylmethyl)-3-phenyl-[1,2,4]oxadiazoles: Antagonists of the Wnt pathway that inhibit tankyrase 1&2 via novel adenosine pocket binding., Shultz MD, Kirby CA, Stams T, Chin DN, Blank J, Charlat O, Cheng H, Cheung AK, Feng Y, Fortin PD, Hood T, Tyagi V, Xu M, Zhang B, Shao W, J Med Chem. 2012 Jan 19. PMID:22260203

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (82 Kb) [Save to disk] Biological Unit Coordinates (3udd.pdb1.gz) 40 Kb Biological Unit Coordinates (3udd.pdb2.gz) 40 Kb Biological Unit Coordinates (3udd.pdb3.gz) 77 Kb LPC: Ligand-Protein Contacts for 3UDD CSU: Contacts of Structural Units for 3UDD Structure Factors (281 Kb) Retrieve 3UDD in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3UDD from S2C, [Save to disk] Re-refined 3udd structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3UDD in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3UDD

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3UDD, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3udd_A] [3udd_B] [3udd] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 3UDD

Community annotation for 3UDD at PDBWiki (http://pdbwiki.org)

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