3UDP date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 09D, EDO, PEG, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceDiscovery and Optimization of a Novel Spiro-pyrrolidine Inhibitors of beta-Secretase (BACE1) Through Fragment Based Drug Design., Efremov IV, Vajdos FF, Borzilleri K, Capetta S, Dorff PH, Dutra JK, Mansour M, Chen H, Goldstein SW, Noell S, Oborski CE, O'Connell TN, O'Sullivan TJ, Pandit J, Wang H, Wei B, Withka JM, McColl A, J Med Chem. 2012 Apr 2. PMID:22468999
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (75 Kb) [Save to disk]
  • Biological Unit Coordinates (3udp.pdb1.gz) 69 Kb
  • LPC: Ligand-Protein Contacts for 3UDP
  • CSU: Contacts of Structural Units for 3UDP
  • Structure Factors (407 Kb)
  • Retrieve 3UDP in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3UDP from S2C, [Save to disk]
  • Re-refined 3udp structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3UDP in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3udp] [3udp_A]
  • SWISS-PROT database:

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