3UFV Oxidoreductase Oxidoreductase Inhibitor date Nov 01, 2011
title Structure Of Rat Nitric Oxide Synthase Heme Domain In Comple Methyl-6-(((3r,4r)-4-((5-(4-Methylpyridin-2-Yl)Pentyl)Oxy)P 3-Yl)Methyl)Pyridin-2-Amine
authors H.Li, T.L.Poulos
compound source
Molecule: Nitric Oxide Synthase, Brain
Chain: A, B
Fragment: Unp Residues 297-718
Synonym: Bnos, Constitutive Nos, Nc-Nos, Nos Type I, Neuron Nos, Nnos, Peptidyl-Cysteine S-Nitrosylase Nos1;
Ec: 1.14.13.39
Engineered: Yes
Organism_scientific: Rattus Norvegicus
Organism_common: Brown Rat,Rat,Rats
Organism_taxid: 10116
Gene: Nos1, Bnos
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pcwori
symmetry Space Group: P 21 21 21
R_factor 0.175 R_Free 0.218
crystal
cell
length a length b length c angle alpha angle beta angle gamma
51.669 110.221 164.254 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.08 Å
ligand ACT, H4B, HEM, HW9, ZN BindingDB enzyme Oxidoreductase E.C.1.14.13.39 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceSelective Monocationic Inhibitors of Neuronal Nitric Oxide Synthase. Binding Mode Insights from Molecular Dynamics Simulations., Huang H, Ji H, Li H, Jing Q, Jansen Labby K, Martasek P, Roman LJ, Poulos TL, Silverman RB, J Am Chem Soc. 2012 Jun 25. PMID:22731813
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (292 Kb) [Save to disk]
  • Biological Unit Coordinates (3ufv.pdb1.gz) 285 Kb
  • LPC: Ligand-Protein Contacts for 3UFV
  • CSU: Contacts of Structural Units for 3UFV
  • Structure Factors (834 Kb)
  • Retrieve 3UFV in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3UFV from S2C, [Save to disk]
  • Re-refined 3ufv structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3UFV in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3UFV
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3UFV, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3ufv] [3ufv_B] [3ufv_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3UFV
  • Community annotation for 3UFV at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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