3UKZ Protein Transport Protein Binding date Nov 10, 2011
title Mouse Importin Alpha: Mouse Cbp80 Cnls Complex
authors M.Marfori, J.K.Forwood, T.G.Lonhienne, B.Kobe
compound source
Molecule: Importin Subunit Alpha-2
Chain: B
Fragment: Unp Residues 70-529
Synonym: Importin Alpha P1, Karyopherin Subunit Alpha-2, Pe Pore Targeting Complex 58 Kda Subunit, Ptac58, Rag Cohort P Srp1-Alpha;
Engineered: Yes
Organism_scientific: Mus Musculus
Organism_common: Mouse
Organism_taxid: 10090
Gene: Kpna2
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Nuclear Cap-Binding Protein Subunit 1
Chain: C
Fragment: Mcbp80 Cnls Peptide, Residues 1-23
Synonym: Cap-Binding Protein 80, Cbp80
Engineered: Yes

Organism_scientific: Mus Musculus
Organism_common: Mouse
Organism_taxid: 10090
Gene: Cbp80
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 21 21 21
R_factor 0.176 R_Free 0.208
crystal
cell
length a length b length c angle alpha angle beta angle gamma
78.943 90.023 100.497 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.30 Å
Gene
Ontology
ChainFunctionProcessComponent
B


Primary referenceStructural Basis of High-Affinity Nuclear Localization Signal Interactions with Importin-alpha, Marfori M, Lonhienne TG, Forwood JK, Kobe B, Traffic. 2012 Jan 16. doi: 10.1111/j.1600-0854.2012.01329.x. PMID:22248489
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (149 Kb) [Save to disk]
  • Biological Unit Coordinates (3ukz.pdb1.gz) 142 Kb
  • CSU: Contacts of Structural Units for 3UKZ
  • Structure Factors (1714 Kb)
  • Retrieve 3UKZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3UKZ from S2C, [Save to disk]
  • Re-refined 3ukz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3UKZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3UKZ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3UKZ, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3ukz_C] [3ukz] [3ukz_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 3UKZ: [ARM] [RNAse_Pc ] by SMART
  • Other resources with information on 3UKZ
  • Community annotation for 3UKZ at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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