3UNC Oxidoreductase date Nov 15, 2011
title Crystal Structure Of Bovine Milk Xanthine Dehydrogenase To 1 Resolution
authors B.T.Eger, K.Okamoto, T.Nishino, E.F.Pai
compound source
Molecule: Xanthine Dehydrogenaseoxidase
Chain: A, B
Synonym: Xanthine Dehydrogenase, Xd, Xanthine Oxidase, Xo, Oxidoreductase;
Ec: 1.17.1.4, 1.17.3.2
Organism_scientific: Bos Taurus
Organism_common: Bovine
Organism_taxid: 9913
Other_details: Isolated From Milk
symmetry Space Group: C 1 2 1
R_factor 0.177 R_Free 0.196
crystal
cell
length a length b length c angle alpha angle beta angle gamma
167.573 124.370 148.177 90.00 91.02 90.00
method X-Ray Diffractionresolution 1.65 Å
ligand CA, CO3, FAD, FES, GOL, MOS, MTE, SAL enzyme Oxidoreductase E.C.1.17.1.4 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • electron transfer activity


  • Primary referenceProtein conformational gating of enzymatic activity in xanthine oxidoreductase., Ishikita H, Eger BT, Okamoto K, Nishino T, Pai EF, J Am Chem Soc. 2012 Jan 18;134(2):999-1009. Epub 2011 Dec 29. PMID:22145797
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (450 Kb) [Save to disk]
  • Biological Unit Coordinates (3unc.pdb1.gz) 441 Kb
  • LPC: Ligand-Protein Contacts for 3UNC
  • CSU: Contacts of Structural Units for 3UNC
  • Structure Factors (4920 Kb)
  • Retrieve 3UNC in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3UNC from S2C, [Save to disk]
  • Re-refined 3unc structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3UNC in 3D
  • Proteopedia, because life has more than 2D.
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  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3UNC
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3UNC, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3unc_A] [3unc_B] [3unc]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 3UNC: [Ald_Xan_dh_C] [CO_deh_flav_C ] by SMART
  • Other resources with information on 3UNC
  • Community annotation for 3UNC at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
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