3UUX Apoptosis date Nov 28, 2011
title Crystal Structure Of Yeast Fis1 In Complex With Mdv1 Fragmen Containing N-Terminal Extension And Coiled Coil Domains
authors Y.Zhang, N.C.Chan, H.Gristick, D.C.Chan
compound source
Molecule: Mitochondria Fission 1 Protein
Chain: A, C
Fragment: Cytoplasmic Portion
Synonym: Mitochondrial Division Protein 2
Engineered: Yes
Organism_scientific: Saccharomyces Cerevisiae S288c
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c
Gene: Fis1, Mdv2, Yil065c
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Rosetta(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pbb75

Molecule: Mitochondrial Division Protein 1
Chain: B, D
Fragment: N-Terminal Extension And Coiled Coil
Synonym: Mitochondria Fission 2 Protein
Engineered: Yes
Mutation: Yes

Organism_scientific: Saccharomyces Cerevisiae S288c
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c
Gene: Mdv1, Fis2, Gag3, Net2, Yjl112w, J0802
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Rosetta(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet15b
symmetry Space Group: I 4 2 2
R_factor 0.270 R_Free 0.284
crystal
cell
length a length b length c angle alpha angle beta angle gamma
174.676 174.676 167.301 90.00 90.00 90.00
method X-Ray Diffractionresolution 3.90 Å
Gene
Ontology
ChainFunctionProcessComponent
A, C


Primary referenceCrystal structure of mitochondrial fission complex reveals scaffolding function for mitochondrial division 1 (mdv1) coiled coil., Zhang Y, Chan NC, Ngo HB, Gristick H, Chan DC, J Biol Chem. 2012 Mar 23;287(13):9855-61. Epub 2012 Feb 1. PMID:22303011
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (90 Kb) [Save to disk]
  • Biological Unit Coordinates (3uux.pdb1.gz) 42 Kb
  • Biological Unit Coordinates (3uux.pdb2.gz) 82 Kb
  • Biological Unit Coordinates (3uux.pdb3.gz) 82 Kb
  • Biological Unit Coordinates (3uux.pdb4.gz) 42 Kb
  • CSU: Contacts of Structural Units for 3UUX
  • Structure Factors (499 Kb)
  • Retrieve 3UUX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3UUX from S2C, [Save to disk]
  • Re-refined 3uux structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3UUX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3UUX
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3UUX, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3uux_B] [3uux_A] [3uux] [3uux_C] [3uux_D]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3UUX
  • Community annotation for 3UUX at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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