3UXK	Isomerase	date	Dec 05, 2011
title	P. Putida Mandelate Racemase Co-Crystallized With The Interm Analogue Benzohydroxamate
authors	A.D.Lietzan, E.Pellmann, M.St Maurice
compound		source
Molecule: Mandelate Racemase Chain: A, B, C, D Synonym: Mr Ec: 5.1.2.2 Engineered: Yes		Organism_scientific: Pseudomonas Putida Organism_taxid: 303 Gene: Mdla Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet-52b(+)
symmetry	Space Group: I 4	R_factor 0.162 R_Free 0.193
crystal cell	length a length b length c angle alpha angle beta angle gamma 148.309 148.309 169.552 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.20 Å
ligand	BHO, MG BindingDB	enzyme	Isomerase E.C.5.1.2.2 BRENDA
Gene Ontology	Chain Function Process Component A, D, C, B
Primary reference	Structure of Mandelate Racemase with Bound Intermediate Analogues Benzohydroxamate and Cupferron., Lietzan AD, Nagar M, Pellmann EA, Bourque JR, Bearne SL, St Maurice M, Biochemistry. 2012 Feb 3. PMID:22264153

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (232 Kb) [Save to disk] Biological Unit Coordinates (3uxk.pdb1.gz) 449 Kb Biological Unit Coordinates (3uxk.pdb2.gz) 445 Kb LPC: Ligand-Protein Contacts for 3UXK CSU: Contacts of Structural Units for 3UXK Structure Factors (1451 Kb) Retrieve 3UXK in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3UXK from S2C, [Save to disk] Re-refined 3uxk structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3UXK in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3UXK

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3UXK, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3uxk_C] [3uxk_D] [3uxk] [3uxk_A] [3uxk_B] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 3UXK: [MR_MLE ] by SMART

Other resources with information on 3UXK

Community annotation for 3UXK at PDBWiki (http://pdbwiki.org)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---