3V0R Unknown Function date Dec 08, 2011
title Crystal Structure Of Alternaria Alternata Allergen Alt A 1
authors M.Chruszcz, R.Solberg, T.Osinski, M.D.Chapman, W.Minor
compound source
Molecule: Major Allergen Alt A 1
Chain: A
Fragment: Unp Residues 26-157
Engineered: Yes
Organism_scientific: Alternaria Alternata
Organism_common: Alternaria Rot Fungus
Organism_taxid: 5599
Gene: Alta1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: I 41 2 2
R_factor 0.167 R_Free 0.190
crystal
cell
length a length b length c angle alpha angle beta angle gamma
70.016 70.016 179.270 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.90 Å
ligand 0FU, 8AC, SO4, UNX enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceAlternaria alternata allergen Alt a 1: A unique beta-barrel protein dimer found exclusively in fungi., Chruszcz M, Chapman MD, Osinski T, Solberg R, Demas M, Porebski PJ, Majorek KA, Pomes A, Minor W, J Allergy Clin Immunol. 2012 Jun 2. PMID:22664167
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (53 Kb) [Save to disk]
  • Biological Unit Coordinates (3v0r.pdb1.gz) 180 Kb
  • Biological Unit Coordinates (3v0r.pdb2.gz) 90 Kb
  • LPC: Ligand-Protein Contacts for 3V0R
  • CSU: Contacts of Structural Units for 3V0R
  • Structure Factors (416 Kb)
  • Retrieve 3V0R in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3V0R from S2C, [Save to disk]
  • Re-refined 3v0r structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3V0R in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3V0R
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3V0R, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3v0r] [3v0r_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3V0R
  • Community annotation for 3V0R at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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