3V2J Lyase date Dec 12, 2011
title Effect Of Sucrose And Glycerol As Cryoprotectans, On The Inh Human Carbonic Anhydrase II
authors M.Aggarwal, A.Mckenna
compound source
Molecule: Carbonic Anhydrase 2
Chain: A
Synonym: Carbonate Dehydratase II, Carbonic Anhydrase C, Ca Carbonic Anhydrase II, Ca-II;
Ec: 4.2.1.1
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ca2
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1 21 1
R_factor 0.140 R_Free 0.167
crystal
cell
length a length b length c angle alpha angle beta angle gamma
42.811 41.704 72.929 90.00 104.49 90.00
method X-Ray Diffractionresolution 1.70 Å
ligand AZM, ZN BindingDB enzyme Lyase E.C.4.2.1.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (126 Kb) [Save to disk]
  • Biological Unit Coordinates (3v2j.pdb1.gz) 121 Kb
  • LPC: Ligand-Protein Contacts for 3V2J
  • CSU: Contacts of Structural Units for 3V2J
  • Structure Factors (213 Kb)
  • Retrieve 3V2J in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3V2J from S2C, [Save to disk]
  • Re-refined 3v2j structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3V2J in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3V2J
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3V2J, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3v2j_A] [3v2j]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3V2J: [Carb_anhydrase ] by SMART
    • Other resources with information on 3V2J
  • Community annotation for 3V2J at PDBWiki (http://pdbwiki.org)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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