3VFG date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Primary referenceIn silico Driven Redesign of a Clinically Relevant Antibody for the Treatment of GD2 Positive Tumors., Ahmed M, Goldgur Y, Hu J, Guo HF, Cheung NK, PLoS One. 2013 May 16;8(5):e63359. doi: 10.1371/journal.pone.0063359. Print 2013. PMID:23696816
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (80 Kb) [Save to disk]
  • Biological Unit Coordinates (3vfg.pdb1.gz) 75 Kb
  • CSU: Contacts of Structural Units for 3VFG
  • Structure Factors (1092 Kb)
  • Retrieve 3VFG in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3VFG from S2C, [Save to disk]
  • Re-refined 3vfg structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3VFG in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3vfg] [3vfg_H] [3vfg_L]
  • SWISS-PROT database:
  • Domains found in 3VFG: [IG_like] [IGv ] by SMART

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