3VGA date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand ZMA BindingDB enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceG-protein-coupled receptor inactivation by an allosteric inverse-agonist antibody., Hino T, Arakawa T, Iwanari H, Yurugi-Kobayashi T, Ikeda-Suno C, Nakada-Nakura Y, Kusano-Arai O, Weyand S, Shimamura T, Nomura N, Cameron AD, Kobayashi T, Hamakubo T, Iwata S, Murata T, Nature. 2012 Jan 29;482(7384):237-40. doi: 10.1038/nature10750. PMID:22286059
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (240 Kb) [Save to disk]
  • Biological Unit Coordinates (3vga.pdb1.gz) 234 Kb
  • LPC: Ligand-Protein Contacts for 3VGA
  • CSU: Contacts of Structural Units for 3VGA
  • Structure Factors (576 Kb)
  • Retrieve 3VGA in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3VGA from S2C, [Save to disk]
  • Re-refined 3vga structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3VGA in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3vga] [3vga_A] [3vga_B] [3vga_C]
  • SWISS-PROT database:
  • Domains found in 3VGA: [IG_like] [IGv ] by SMART

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