3VHD date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand VHE BindingDB enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceDesign and synthesis of novel macrocyclic 2-amino-6-arylpyrimidine Hsp90 inhibitors., Suda A, Koyano H, Hayase T, Hada K, Kawasaki K, Komiyama S, Hasegawa K, Fukami TA, Sato S, Miura T, Ono N, Yamazaki T, Saitoh R, Shimma N, Shiratori Y, Tsukuda T, Bioorg Med Chem Lett. 2012 Jan 15;22(2):1136-41. Epub 2011 Dec 1. PMID:22192591
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (84 Kb) [Save to disk]
  • Biological Unit Coordinates (3vhd.pdb1.gz) 40 Kb
  • Biological Unit Coordinates (3vhd.pdb2.gz) 41 Kb
  • LPC: Ligand-Protein Contacts for 3VHD
  • CSU: Contacts of Structural Units for 3VHD
  • Structure Factors (2589 Kb)
  • Retrieve 3VHD in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3VHD from S2C, [Save to disk]
  • Re-refined 3vhd structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3VHD in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3vhd] [3vhd_A] [3vhd_B]
  • SWISS-PROT database:
  • Domain found in 3VHD: [HATPase_c ] by SMART

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