3VJI		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	J53	enzyme
Gene Ontology	Chain Function Process Component A, B
Primary reference	Peroxisome proliferator-activated receptors (PPARs) have multiple binding points that accommodate ligands in various conformations: phenylpropanoic acid-type PPAR ligands bind to PPAR in different conformations, depending on the subtype., Kuwabara N, Oyama T, Tomioka D, Ohashi M, Yanagisawa J, Shimizu T, Miyachi H, J Med Chem. 2012 Jan 26;55(2):893-902. Epub 2012 Jan 10. PMID:22185225

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (170 Kb) [Save to disk] Biological Unit Coordinates (3vji.pdb1.gz) 165 Kb LPC: Ligand-Protein Contacts for 3VJI CSU: Contacts of Structural Units for 3VJI Structure Factors (252 Kb) Retrieve 3VJI in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3VJI from S2C, [Save to disk] Re-refined 3vji structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3VJI in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3vji] [3vji_A] [3vji_B] SWISS-PROT database: Domain found in 3VJI: [HOLI ] by SMART

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