3VKH date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
note 3VKH (Molecule of the Month:pdb176)
Gene DDB
Gene
Ontology
ChainFunctionProcessComponent
B, A


Primary referenceThe 2.8 A crystal structure of the dynein motor domain., Kon T, Oyama T, Shimo-Kon R, Imamula K, Shima T, Sutoh K, Kurisu G, Nature. 2012 Mar 7;484(7394):345-50. doi: 10.1038/nature10955. PMID:22398446
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (859 Kb) [Save to disk]
  • Biological Unit Coordinates (3vkh.pdb1.gz) 439 Kb
  • Biological Unit Coordinates (3vkh.pdb2.gz) 421 Kb
  • CSU: Contacts of Structural Units for 3VKH
  • Structure Factors (813 Kb)
  • Retrieve 3VKH in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3VKH from S2C, [Save to disk]
  • Re-refined 3vkh structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3VKH in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3vkh] [3vkh_A] [3vkh_B] [3vkh_C] [3vkh_D]
  • SWISS-PROT database:
  • Domain found in 3VKH: [AAA ] by SMART

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