3VMF date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand GTP, MG, SO4 enzyme
Gene APE ; APE
Gene
Ontology
ChainFunctionProcessComponent
A


B


Primary referenceStructural basis for translation termination by archaeal RF1 and GTP-bound EF1alpha complex., Kobayashi K, Saito K, Ishitani R, Ito K, Nureki O, Nucleic Acids Res. 2012 Jul 5. PMID:22772989
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (128 Kb) [Save to disk]
  • Biological Unit Coordinates (3vmf.pdb1.gz) 123 Kb
  • LPC: Ligand-Protein Contacts for 3VMF
  • CSU: Contacts of Structural Units for 3VMF
  • Structure Factors (591 Kb)
  • Retrieve 3VMF in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3VMF from S2C, [Save to disk]
  • Re-refined 3vmf structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3VMF in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3vmf] [3vmf_A] [3vmf_B]
  • SWISS-PROT database:
  • Domain found in 3VMF: [eRF1_1 ] by SMART

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