3VPY date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand MSE enzyme
Primary referenceCrystal Structure of Arabidopsis thaliana Dawdle Forkhead-Associated Domain reveals a conserved phospho-threonine recognition cleft for Dicer-like1 binding., Machida S, Yuan AY, Mol Plant. 2013 Jan 11. PMID:23313986
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (54 Kb) [Save to disk]
  • Biological Unit Coordinates (3vpy.pdb1.gz) 49 Kb
  • LPC: Ligand-Protein Contacts for 3VPY
  • CSU: Contacts of Structural Units for 3VPY
  • Structure Factors (200 Kb)
  • Retrieve 3VPY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3VPY from S2C, [Save to disk]
  • Re-refined 3vpy structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3VPY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3vpy] [3vpy_A]
  • SWISS-PROT database:
  • Domain found in 3VPY: [FHA ] by SMART

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