3VQ2 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand DAO, LP4, LP5, MYR, NAG enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


C, D


Primary referenceStructural basis of species-specific endotoxin sensing by innate immune receptor TLR4/MD-2., Ohto U, Fukase K, Miyake K, Shimizu T, Proc Natl Acad Sci U S A. 2012 Apr 24. PMID:22532668
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (486 Kb) [Save to disk]
  • Biological Unit Coordinates (3vq2.pdb1.gz) 476 Kb
  • LPC: Ligand-Protein Contacts for 3VQ2
  • CSU: Contacts of Structural Units for 3VQ2
  • Structure Factors (1063 Kb)
  • Retrieve 3VQ2 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3VQ2 from S2C, [Save to disk]
  • Re-refined 3vq2 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3VQ2 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3vq2] [3vq2_A] [3vq2_B] [3vq2_C] [3vq2_D]
  • SWISS-PROT database:
  • Domains found in 3VQ2: [LRR] [LRRCT] [ML ] by SMART

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