3VSO date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand EK1 enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, A


Primary referenceDesign and synthesis of a series of alpha-benzyl phenylpropanoic acid-type peroxisome proliferator-activated receptor (PPAR) gamma partial agonists with improved aqueous solubility., Ohashi M, Oyama T, Putranto EW, Waku T, Nobusada H, Kataoka K, Matsuno K, Yashiro M, Morikawa K, Huh NH, Miyachi H, Bioorg Med Chem. 2013 Apr 15;21(8):2319-32. doi: 10.1016/j.bmc.2013.02.003. Epub , 2013 Feb 14. PMID:23490155
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (91 Kb) [Save to disk]
  • Biological Unit Coordinates (3vso.pdb1.gz) 86 Kb
  • Biological Unit Coordinates (3vso.pdb2.gz) 87 Kb
  • LPC: Ligand-Protein Contacts for 3VSO
  • CSU: Contacts of Structural Units for 3VSO
  • Structure Factors (318 Kb)
  • Retrieve 3VSO in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3VSO from S2C, [Save to disk]
  • Re-refined 3vso structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3VSO in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3vso] [3vso_A] [3vso_B]
  • SWISS-PROT database:
  • Domain found in 3VSO: [HOLI ] by SMART

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