3VTO date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CA, CL, FE enzyme
Primary referenceCrystal structure of the C-terminal domain of Mu phage central spike and functions of bound calcium ion., Harada K, Yamashita E, Nakagawa A, Miyafusa T, Tsumoto K, Ueno T, Toyama Y, Takeda S, Biochim Biophys Acta. 2013 Jan;1834(1):284-91. doi: 10.1016/j.bbapap.2012.08.015., Epub 2012 Aug 24. PMID:22922659
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (221 Kb) [Save to disk]
  • Biological Unit Coordinates (3vto.pdb1.gz) 109 Kb
  • Biological Unit Coordinates (3vto.pdb2.gz) 108 Kb
  • LPC: Ligand-Protein Contacts for 3VTO
  • CSU: Contacts of Structural Units for 3VTO
  • Structure Factors (809 Kb)
  • Retrieve 3VTO in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3VTO from S2C, [Save to disk]
  • Re-refined 3vto structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3VTO in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3vto] [3vto_A] [3vto_B] [3vto_C] [3vto_P] [3vto_Q] [3vto_R]
  • SWISS-PROT database:

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