3VUP		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	SO4, TRS	enzyme
Gene Ontology	Chain Function Process Component A, B
Primary reference	Structure of beta-1,4-mannanase from the common sea hare Aplysia kurodai at 1.05 A resolution., Mizutani K, Tsuchiya S, Toyoda M, Nanbu Y, Tominaga K, Yuasa K, Takahashi N, Tsuji A, Mikami B, Acta Crystallogr Sect F Struct Biol Cryst Commun. 2012 Oct 1;68(Pt 10):1164-8., doi: 10.1107/S1744309112037074. Epub 2012 Sep 25. PMID:23027740

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (286 Kb) [Save to disk] Biological Unit Coordinates (3vup.pdb1.gz) 141 Kb Biological Unit Coordinates (3vup.pdb2.gz) 143 Kb LPC: Ligand-Protein Contacts for 3VUP CSU: Contacts of Structural Units for 3VUP Structure Factors (3820 Kb) Retrieve 3VUP in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3VUP from S2C, [Save to disk] Re-refined 3vup structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3VUP in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3vup] [3vup_A] [3vup_B] SWISS-PROT database:

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