3VVA date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CHW, FE, OH enzyme
Gene
Ontology
ChainFunctionProcessComponent
C, D, A, B


Primary referenceStructure of the trypanosome cyanide-insensitive alternative oxidase., Shiba T, Kido Y, Sakamoto K, Inaoka DK, Tsuge C, Tatsumi R, Takahashi G, Balogun EO, Nara T, Aoki T, Honma T, Tanaka A, Inoue M, Matsuoka S, Saimoto H, Moore AL, Harada S, Kita K, Proc Natl Acad Sci U S A. 2013 Mar 19;110(12):4580-5. doi:, 10.1073/pnas.1218386110. Epub 2013 Mar 4. PMID:23487766
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (184 Kb) [Save to disk]
  • Biological Unit Coordinates (3vva.pdb1.gz) 89 Kb
  • Biological Unit Coordinates (3vva.pdb2.gz) 90 Kb
  • LPC: Ligand-Protein Contacts for 3VVA
  • CSU: Contacts of Structural Units for 3VVA
  • Structure Factors (896 Kb)
  • Retrieve 3VVA in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3VVA from S2C, [Save to disk]
  • Re-refined 3vva structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3VVA in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3vva] [3vva_A] [3vva_B] [3vva_C] [3vva_D]
  • SWISS-PROT database:

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