3VXX date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 5CM, ACT, EDO enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural basis of the versatile DNA recognition ability of the methyl-CpG binding domain of methyl-CpG binding domain protein 4., Otani J, Arita K, Kato T, Kinoshita M, Kimura H, Suetake I, Tajima S, Ariyoshi M, Shirakawa M, J Biol Chem. 2013 Mar 1;288(9):6351-62. doi: 10.1074/jbc.M112.431098. Epub 2013, Jan 10. PMID:23316048
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (31 Kb) [Save to disk]
  • Biological Unit Coordinates (3vxx.pdb1.gz) 26 Kb
  • LPC: Ligand-Protein Contacts for 3VXX
  • CSU: Contacts of Structural Units for 3VXX
  • Structure Factors (155 Kb)
  • Retrieve 3VXX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3VXX from S2C, [Save to disk]
  • Re-refined 3vxx structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3VXX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3vxx] [3vxx_A] [3vxx_B] [3vxx_C]
  • SWISS-PROT database:
  • Domain found in 3VXX: [MBD ] by SMART

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