OCA Atlas for 3W6G

3W6G

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

FLC

enzyme

Gene
Ontology

Chain	Function	Process	Component
L, S, B, T, A, D, C, H, I, F, Q, M, N, E, G, K, J, R, P, O	peroxidase activity antioxidant activity peroxiredoxin activity

Primary reference

Structure of peroxiredoxin from the anaerobic hyperthermophilic archaeon Pyrococcus horikoshii., Nakamura T, Mori A, Niiyama M, Matsumura H, Tokuyama C, Morita J, Uegaki K, Inoue T, Acta Crystallogr Sect F Struct Biol Cryst Commun. 2013 Jul;69(Pt 7):719-22. doi: , 10.1107/S1744309113014036. Epub 2013 Jun 27. PMID:23832195

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (709 Kb) [Save to disk]

Biological Unit Coordinates (3w6g.pdb1.gz) 355 Kb

Biological Unit Coordinates (3w6g.pdb2.gz) 356 Kb

LPC: Ligand-Protein Contacts for 3W6G

CSU: Contacts of Structural Units for 3W6G

Structure Factors (2066 Kb)

Retrieve 3W6G in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 3W6G from S2C, [Save to disk]

Re-refined 3w6g structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3W6G in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3w6g] [3w6g_A] [3w6g_B] [3w6g_C] [3w6g_D] [3w6g_E] [3w6g_F] [3w6g_G] [3w6g_H] [3w6g_I] [3w6g_J] [3w6g_K] [3w6g_N] [3w6g_L] [3w6g_M] [3w6g_O] [3w6g_P] [3w6g_Q] [3w6g_R] [3w6g_S] [3w6g_T]

SWISS-PROT database:

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]