3W7F	Crystal structure of the C(30) carotenoid dehydrosqualene synthase from staphylococcus aureus complexed with farnesyl thiopyrophosphate	date	2013-02-28
authors	Liu, C.I., Jeng, W.Y., Wang, A.H., Oldfield, E.
compound		source
symmetry		R_factor R_Free 0.265
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	2.25
ligand	FPS, MG	enzyme
note	3W7F supersedes 2ZCP
Gene Ontology	Chain Function Process Component A, B
Primary reference	A cholesterol biosynthesis inhibitor blocks Staphylococcus aureus virulence., Liu CI, Liu GY, Song Y, Yin F, Hensler ME, Jeng WY, Nizet V, Wang AH, Oldfield E, Science. 2008 Mar 7;319(5868):1391-4. Epub 2008 Feb 14. PMID:18276850

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (114 Kb) [Save to disk] Biological Unit Coordinates (3w7f.pdb1.gz) 55 Kb Biological Unit Coordinates (3w7f.pdb2.gz) 55 Kb LPC: Ligand-Protein Contacts for 3W7F CSU: Contacts of Structural Units for 3W7F Structure Factors (373 Kb) Retrieve 3W7F in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3W7F from S2C, [Save to disk] Re-refined 3w7f structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3W7F in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3W7F

Cartoon representation from PDB Cartoon Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute Crystal Contacts, from CryCo at Weizmann Institute 3D motif for 3W7F, from MSDmotif at EBI Fold representative 3w7f from FSSP and Dali (Families of Structurally Similar Proteins)

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3w7f] [3w7f_B] [3w7f_A] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 3W7F

Community annotation for 3W7F at PDBWiki (http://pdbwiki.org)

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