3WA6 Hydrolase date Apr 27, 2013
title Crystal Structure Of Tannase From Lactobacillus Plantarum In Orthorhombic Crystal
authors Y.Matoba, N.Tanaka, M.Sugiyama
compound source
Molecule: Tannase
Chain: A
Ec: 3.1.1.20
Engineered: Yes
Organism_scientific: Lactobacillus Plantarum
Organism_taxid: 1590
Strain: Sn35n
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet-21a(+)
symmetry Space Group: C 2 2 21
R_factor 0.178 R_Free 0.207
crystal
cell
length a length b length c angle alpha angle beta angle gamma
55.870 78.240 200.010 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.80 Å
ligand SO4 enzyme Hydrolase E.C.3.1.1.20 BRENDA
Primary referenceCrystallographic and mutational analyses of tannase from Lactobacillus plantarum., Matoba Y, Tanaka N, Noda M, Higashikawa F, Kumagai T, Sugiyama M, Proteins. 2013 Jul 8. doi: 10.1002/prot.24355. PMID:23836494
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (82 Kb) [Save to disk]
  • Biological Unit Coordinates (3wa6.pdb1.gz) 77 Kb
  • Biological Unit Coordinates (3wa6.pdb2.gz) 153 Kb
  • LPC: Ligand-Protein Contacts for 3WA6
  • CSU: Contacts of Structural Units for 3WA6
  • Structure Factors (358 Kb)
  • Retrieve 3WA6 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3WA6 from S2C, [Save to disk]
  • Re-refined 3wa6 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3WA6 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3WA6
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3WA6, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3wa6_A] [3wa6]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3WA6
  • Community annotation for 3WA6 at PDBWiki (http://pdbwiki.org)

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science