3WIG Transferase Transferase Inhibitor date Sep 12, 2013
title Human Mek1 Kinase In Complex With Ch5126766 And Mgamp-Pnp
authors C.M.Lukacs, C.Janson, V.Schuck
compound source
Molecule: Dual Specificity Mitogen-Activated Protein Kinase
Chain: A
Synonym: Map Kinase Kinase 1, Mapkk 1, Mkk1, Erk Activator Mapkerk Kinase 1, Mek 1;
Ec: 2.7.12.2
Engineered: Yes
Other_details: Unp Residues 62-270, 303-393
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Map2k1, Mek1, Prkmk1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
symmetry Space Group: P 31 2 1
R_factor 0.215 R_Free 0.250
crystal
cell
length a length b length c angle alpha angle beta angle gamma
136.366 136.366 59.764 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.70 Å
ligand ANP, CHU, CL, MG, PG4 enzyme Transferase E.C.2.7.12.2 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceDisruption of CRAF-Mediated MEK Activation Is Required for Effective MEK Inhibition in KRAS Mutant Tumors., Lito P, Saborowski A, Yue J, Solomon M, Joseph E, Gadal S, Saborowski M, Kastenhuber E, Fellmann C, Ohara K, Morikami K, Miura T, Lukacs C, Ishii N, Lowe S, Rosen N, Cancer Cell. 2014 May 12;25(5):697-710. doi: 10.1016/j.ccr.2014.03.011. Epub 2014, Apr 17. PMID:24746704
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (52 Kb) [Save to disk]
  • Biological Unit Coordinates (3wig.pdb1.gz) 47 Kb
  • Biological Unit Coordinates (3wig.pdb2.gz) 91 Kb
  • LPC: Ligand-Protein Contacts for 3WIG
  • CSU: Contacts of Structural Units for 3WIG
  • Structure Factors (220 Kb)
  • Retrieve 3WIG in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3WIG from S2C, [Save to disk]
  • Re-refined 3wig structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3WIG in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3WIG
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3WIG, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3wig_A] [3wig]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3WIG: [S_TKc ] by SMART
  • Other resources with information on 3WIG
  • Community annotation for 3WIG at PDBWiki (http://pdbwiki.org)

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