3WPM date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand FE, GDE enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, A
  • oxidoreductase activity
  • dioxygenase activity


    • Primary referenceMolecular Mechanism of Strict Substrate Specificity of an Extradiol Dioxygenase, DesB, Derived from Sphingobium sp. SYK-6., Sugimoto K, Senda M, Kasai D, Fukuda M, Masai E, Senda T, PLoS One. 2014 Mar 21;9(3):e92249. doi: 10.1371/journal.pone.0092249. eCollection, 2014. PMID:24657997
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (131 Kb) [Save to disk]
  • Biological Unit Coordinates (3wpm.pdb1.gz) 125 Kb
  • LPC: Ligand-Protein Contacts for 3WPM
  • CSU: Contacts of Structural Units for 3WPM
  • Structure Factors (459 Kb)
  • Retrieve 3WPM in mmCIF format [Save to disk]
  • Re-refined 3wpm structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3WPM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3wpm] [3wpm_A] [3wpm_B]
  • SWISS-PROT database:

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