3ZOS	Transferase	date	Feb 22, 2013
title	Structure Of The Ddr1 Kinase Domain In Complex With Ponatini
authors	P.Canning, J.M.Elkins, S.Goubin, P.Mahajan, A.Bradley, D.Coutandi Delft, C.H.Arrowsmith, A.M.Edwards, C.Bountra, A.Bullock
compound		source
Molecule: Epithelial Discoidin Domain-Containing Receptor 1 Chain: A, B Fragment: Kinase Domain, Residues 601-913 Synonym: Epithelial Discoidin Domain Receptor, Cd167 Antige Family Member A, Cell Adhesion Kinase, Discoidin Receptor T Kinase, Hgk2, Mammary Carcinoma Kinase 10, Mck-10, Protein- Kinase 3a, Protein-Tyrosine Kinase Rtk-6, Trk E, Tyrosine K Tyrosine-Protein Kinase Cak, Cd167a; Ec: 2.7.10.1 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Spodoptera Frugiperda Expression_system_taxid: 7108 Expression_system_cell_line: Sf9 Expression_system_vector_type: Baculovirus Expression_system_plasmid: Pfb-Lic-Bse Other_details: Mammalian Gene Collection (Mgc)
symmetry	Space Group: P 1 21 1	R_factor 0.206 R_Free 0.234
crystal cell	length a length b length c angle alpha angle beta angle gamma 68.951 61.733 80.193 90.00 104.40 90.00
method	X-Ray Diffraction	resolution	1.92 Å
ligand	0LI, EDO	enzyme	Transferase E.C.2.7.10.1 BRENDA
Gene Ontology	Chain Function Process Component A, B
Primary reference	Structural mechanisms determining inhibition of the collagen receptor DDR1 by selective and multi-targeted type II kinase inhibitors., Canning P, Tan L, Chu K, Lee SW, Gray NS, Bullock AN, J Mol Biol. 2014 Apr 22. pii: S0022-2836(14)00198-3. doi:, 10.1016/j.jmb.2014.04.014. PMID:24768818

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (209 Kb) [Save to disk] Biological Unit Coordinates (3zos.pdb1.gz) 102 Kb Biological Unit Coordinates (3zos.pdb2.gz) 101 Kb LPC: Ligand-Protein Contacts for 3ZOS CSU: Contacts of Structural Units for 3ZOS Structure Factors (1788 Kb) Retrieve 3ZOS in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3ZOS from S2C, [Save to disk] Re-refined 3zos structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3ZOS in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3ZOS

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3ZOS, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3zos_A] [3zos_B] [3zos] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 3ZOS: [TyrKc ] by SMART

Other resources with information on 3ZOS

Community annotation for 3ZOS at PDBWiki (http://pdbwiki.org)

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---