3ZPJ Unknown Function date Feb 28, 2013
title Crystal Structure Of Ton1535 From Thermococcus Onnurineus Na
authors J.H.Jeong, Y.G.Kim
compound source
Molecule: Ton_1535
Chain: A
Engineered: Yes
 Organism_scientific: Thermococcus Onnurineus
Organism_taxid: 523850
Strain: Na1
Expression_system: Escherichia Coli B
Expression_system_taxid: 37762
Expression_system_strain: B834(De3) Ril
Expression_system_vector_type: Plasmid
Expression_system_vector: Pet30a
symmetry Space Group: H 3 2
R_factor 0.1943 R_Free 0.2459
crystal
cell
length a length b length c angle alpha angle beta angle gamma
117.954 117.954 208.232 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.30 Å
Primary referenceStructure of the hypothetical protein Ton1535 from Thermococcus onnurineus NA1 reveals unique structural properties by a left-handed helical turn in normal alpha-solenoid protein., Jeong JH, Kim YS, Rojvirija C, Jin Cha H, Kim YG, Chul Ha S, Proteins. 2013 Nov 22. doi: 10.1002/prot.24444. PMID:24265202
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (124 Kb) [Save to disk]
  • Biological Unit Coordinates (3zpj.pdb1.gz) 120 Kb
  • CSU: Contacts of Structural Units for 3ZPJ
  • Structure Factors (201 Kb)
  • Retrieve 3ZPJ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3ZPJ from S2C, [Save to disk]
  • Re-refined 3zpj structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3ZPJ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3ZPJ
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3ZPJ, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3zpj] [3zpj_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 3ZPJ
  • Community annotation for 3ZPJ at PDBWiki (http://pdbwiki.org)

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